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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789010.1_cds_XP_016493953.1_792
CDS Infomation

[gene=LOC107813003] [db_xref=GeneID:107813003] [protein=aspartokinase 2, chloroplastic-like isoform X4] [protein_id=XP_016493953.1] [location=join(48348..48796,48891..48931,49605..49759,50265..50414,50500..50595,50730..50846,51424..51543,51627..51719,51791..51907,52130..52246,52664..52726,52820..52960)] [gbkey=CDS]
Sequence

ATGGCATCTTTGTCACATTTTTGTGGGGTTAAAACTCCCTGCTCTTCTCTATTCAAAAGA
AGCGTGCACTTCCGGCAGCTTGATTTTGTGGCTTCTGTCCCTTTTGCTTCTGCACCAAGT
AAGTATGTGAAGGCTTCTTGTTGTGAGAGAGTGACATGTAAAGCACAAGCAGCTGATGTA
GTCGAGCTTAAAGAAACCAAGAATGAAGCTTTTGGTGAATTTACATGTGTGATGAAGTTT
GGTGGTTCATCAGTAGCCTCAGCGGAGAGAATGAGAGAAGTAGCTGATCTTATTCTTAGC
TTTCCTGAAGAGAGACCTGTTATTGTTCTCTCTGCAATGGGAAAGACAACAAACAACCTT
TTGCTGGCTGGTGAAAAGGCTGTCACTTGTGGTGTTTCCAATGTTTGTGATCTGCAAGAA
TTAGATTTTATAAAGGATCTCCATTTTAGGACAATCGACCAACTTGGAGTAGAAAAGTCT
ACCATTTCAAAGCATCTACTTGAATTGGAACAACTTTTGAACAGAATTGCTATGATGAAG
GAGTTGACTCCACGAACAAGGGATTACTTGGTCTCCTTTGGAGAGTGCATGTCCACAAGA
ATATTTACAGCCTATCTGAATAAACTCGGTGTCAAAGCCCGCCAGTATGATGCATTTGAG
ATGGGTATTATAACAACTGATGAATTTACTAATGCGGATATATTGGAGGCAACTTATCCT
GCTGTTGCAAAGAGATTAAGTGGTGATTGGATGAATAATCCTGCAATCCCTATTGTCACT
GGGTTTCTGGGAAAGGGTTGGAGGACTTGTGCTGTGACTACACTAGGTAGGGGCGGTAGT
GACTTGACTGCTACAACCATTGGTAAAGCATTGGGATTACGAGAAATTCAGGTCTGGAAG
GATGTTGATGGTGTTTTGACATGTGATCCCAACATATATCCACGTGCACAGCCTGTGCCT
TATCTAACTTTTGATGAGGCAGCTGAACTTGCATACTTTGGCGCACAGGTCCTTCATCCA
CAGTCCATGAGGCCGGCAAGAGAGGGTGATATTCCTGTTAGGGTTAAAAACTCATATAAT
CCTAAAGCTCCTGGTACCCTTATCTGTAGAGCAAGAGATATGAGTAAGGCAGTACTTACA
AGTATTGTTCTGAAACGAAATGTAACCATGTTGGATATCGTGAGTACCCGCATGCTCGGT
CAATTTGGTTTCCTTGCAAAGGTTTTCTCCATCTTTGAAGATTTAGGTATATCGGTTGAC
GTCGTTGCGACAAGTGAAGTTAGTATTTCCTTGACATTGGACCCATCAAAACTTTGGAGC
AGAGAATTGATTCAGCAGGAGCTTGATCATGTCGTGGAAGAACTTGAGAAAATTGCAGTT
GTGAATCTACTTCAACACAGATCAATCATCTCTCTGATTGGGAACGTCCAGAGGTCCTCT
CTGATTCTCGAAAAGGCTTTCCACGTTCTGCGTACCAATGGGGTCAATGTTCAAATGATC
TCTCAAGGTGCATCGAAGGTCAATATCTCATTGATAGTAAATGATAGTGAAGCAGAACAA
TGTGTAAGGGCTCTACACAAAACATTCTTTGAAAGTGATCTTTCTGAACTAGTCTGGGAA
AATGGACATGTTACTCCCTTATCCACATTGTCCACTTGA

Peptide Sequence

PEP ID

XP_016493953.1
PEP Infomation

PREDICTED: aspartokinase 2, chloroplastic-like isoform X4 [Nicotiana tabacum]
Sequence

MASLSHFCGVKTPCSSLFKRSVHFRQLDFVASVPFASAPSKYVKASCCERVTCKAQAADV
VELKETKNEAFGEFTCVMKFGGSSVASAERMREVADLILSFPEERPVIVLSAMGKTTNNL
LLAGEKAVTCGVSNVCDLQELDFIKDLHFRTIDQLGVEKSTISKHLLELEQLLNRIAMMK
ELTPRTRDYLVSFGECMSTRIFTAYLNKLGVKARQYDAFEMGIITTDEFTNADILEATYP
AVAKRLSGDWMNNPAIPIVTGFLGKGWRTCAVTTLGRGGSDLTATTIGKALGLREIQVWK
DVDGVLTCDPNIYPRAQPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYN
PKAPGTLICRARDMSKAVLTSIVLKRNVTMLDIVSTRMLGQFGFLAKVFSIFEDLGISVD
VVATSEVSISLTLDPSKLWSRELIQQELDHVVEELEKIAVVNLLQHRSIISLIGNVQRSS
LILEKAFHVLRTNGVNVQMISQGASKVNISLIVNDSEAEQCVRALHKTFFESDLSELVWE
NGHVTPLSTLST

Transcript Sequence

Gene sequence data has not been registered.